Current Projects   

As Collection Manager of the microfossil collection at UCMP, my primary task is to organize and database a century's accumulation of slides, samples, documents, and literature so that this wealth of information can be readily accessed for research and teaching at the museum and via the internet. There are hundreds of thousands of slides containing millions (billions?) of specimens awaiting my attention. Hopefully, my eyesight and sanity will last long enough to fulfill a significant part of this mission before my own fossilization ensues! You can visit the now rapidly expanding microfossil database and learn more about these and considerably larger fossils at the UCMP website.

As Museum Scientist, my research interests are in the field of micropaleontology, particularly Foraminifera and Ostracoda. I am currently involved in projects on the Galapagos Islands and on Aegina Island (Greece), but primarily focused on the microfossils of Chile and the Galapagos, and a modern microfauna in California, as summarized below:


CHILEAN NEOGENE

In collaboration with ostracodologist Dawn Peterson (UCMP Research Associate), malacologist Sven Nielsen (GeoForschungsZentrum Potsdam), and sedimentologist Alfonso Encinas (Universidad de Chile, Concepción), I have been studying microfossils from numerous localities in south-central Chile, including the coastal outcrops near Navidad that were first described by Charles Darwin in 1846. The purpose of my study is to resolve contradictory interpretations of the age and depositional environments of the marine units exposed along the central coast of Chile, which include the Navidad Formation, the Ranquil Formation along Peninsula Arauco, and the Lacui Formation of Chiloé Island. This study is particularly challenging because the only good exposures of these rocks are the extensive coastal bluffs and beach terraces, which consist of low-dipping beds that apparently span just one or two short intervals of geologic time. (In contrast, California's coasts, canyons, and roadcuts typically reveal highly tilted strata where considerably longer intervals of geologic time can be readily traversed.) Foraminifera and ostracodes recovered primarily from siltstones reveal that all of these units were deposited on the lower continental slope (>1500 m) during the late Miocene and early Pliocene (10-4 Ma). Mixed age and depth associations support a scenario similar to the modern continental margin landward of the Peru-Chile trench, where deep basins episodically receive sediments displaced from shallower depths. Hence, although most of the gastropods are shelfal taxa, they were transported by gravity flows onto the deep basin floor. Our samples have yielded a microfauna that consists of approximately 350 species of Foraminifera and 150 species of Ostracoda, which we are now in the process of documenting. Representatives of this microfauna are shown below. We have also examined core samples from numerous exploration wells in the region that have revealed more of the geologic section and provided us with some insight on the lateral extent of the strata exposed along the coast.

View a poster about the coastal study

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Rio Rapel area, northwest of Navidad

Pta Alta-Pta Perro

Punta Alta

Punta Alta

Punta Perro

Turritella, P. Perro

Matanzas

Mostazal

N of Rio Rapel

Arauco Peninsula, between Arauco and Lebu

N of Pta Fraile

N of Pta Fraile

Punta Fraile

Punta Fraile

Pta Huenteguapi

Pta Huenteguapi

Foraminifera from the Chilean Neogene

Ostracoda from the Chilean Neogene

 



LAKE MERRITT

Several years after Samuel Merritt dammed this former tidal slough in 1869 and began developing its surrounding wetland, flaws in his "Jewel of Oakland" became unpleasantly evident as silt and algae accumulated. Although part of it was designated as the nation's first wildlife refuge (protecting more than 90 species of migrating waterfowl), Lake Merritt also serves as a drainage basin for the regional flood control system, receiving urban runoff from a 4,650 acre watershed through 60 storm drain outfalls. Four culverted creeks drain into this 145-acre lagoon from the east, while tidegates regulate flow through a narrow channel connecting it with Oakland Inner Harbor and San Francisco Bay. The lagoon is also polluted by illegal dumping of substances toxic to marine life, such as paints, solvents, and oil. In addition to mechanical harvesting of its widgeon grass, 1,000 to 7,000 pounds of trash are removed from Lake Merritt every month.

Anticipating its proposed remediation by the City of Oakland, Jere Lipps and I realized there was an opportunity here to study before and after effects on the microfauna. Several other studies have revealed foraminiferal responses to pollutants, suggesting their utility as environmental monitors. Dawn Peterson has joined our effort in collecting and analyzing the bottom samples from Lake Merritt. Thus far, we have identified 21 species of Foraminifera and 17 species of Ostracoda, but our most recent collection is augmenting those numbers. The more common species (shown below) are typical inhabitants of hyposaline waters. Histologic staining reveals that the majority of our assemblages from depths below one meter were devoid of living specimens when collected. Most of the living specimens were recovered from water depths less than a meter in the tidal inlet and along the margins of the lagoon where and there are visible signs of life, such as algae and mussels. Data obtained with a YSI 85D® water monitoring probe confirms that stratification of the water column results in an unmixed deeper layer characterized by low levels of dissolved oxygen. The decay of organics on the bottom of the lagoon depletes the Oxygen and releases hydrogen sulfide, which is evident in the stinky dark mud samples and areas where bubbles rise to the surface. We suspect most of the deeper assemblages were created by post-mortem transport from the shallow margins, but we cannot rule out the possibility of intermittent mass mortalities when dissolved oxygen levels drop below a tolerable threshold.

Unlike foraminiferal assemblages in the bay, those in Lake Merritt often include malformed specimens, but surprisingly in lower relative abundance than typically reported from stressed environments where they have been linked to high levels of contaminants, heavy metals, industrial pollution, and domestic sewage.

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Views of Lake Merritt

Aerial View

Lake View 1

Lake View 2

Lake View 3

Jere sampling

Dawn sampling

Tidal inlet

Surface oil film

Visitor

Foraminifera from Lake Merritt

Malformed Ammonia tepida (first specimen shown above is normal)

Ostracoda from Lake Merritt

 



GALAPAGOS ISLANDS

Although the modern microfauna of this famous archipelago has received a fair amount of study, those in sediments that were uplifted and which are now exposed along the edges of several islands have not been previously studied. It includes Pleistocene foraminifera, ostracodes, and micromolluscs. With several colleagues, I recently presented a poster about this project, and we are now preparing a manuscript for publication.

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foraminifera

ostracode

micromollusc

  (There are lots of specimens shown on the poster!
)
 

FOSSIL WORM TUBES CONSTRUCTED OF FORAMINIFERA

Megan Flenniken (Stony Brook University), Jere Lipps, and I recently completed a study of unusual concentrations of foraminiferal tests that we interpreted to be the remnants of worm tubes. We obtained more than 70 specimens from the Miocene Monterey Formation near Carmel and Mission Viejo, California. Lithostratigraphic and biostratigraphic correlations firmly establish their ages as late middle Miocene near Carmel and early late Miocene at Mission Viejo; which means they are 9-13 million years old. The foraminifera indicate deposition occurred at bathyal depths. Surrounding strata are fine-grained, thin bedded and lack heavy bioturbation, features typical of the siliceous facies of the upper Monterey Formation and indicative of dysaerobic conditions. The foraminiferal concentrations are arranged in tube-like shapes similar to those constructed by some modern marine worms. Because agglutinated worm tubes readily disaggregate after the worm’s death, very few tubes have been found in the fossil record. In addition, although some modern worms construct their tubes using foraminiferal tests, the fossil record of this phenomenon to date is represented by a single specimen from the Lias (Lower Jurassic). The fossil tubes from the Miocene of California have closest affinity with the polychaete worm genus Pectinaria, which includes Recent species living at littoral to abyssal depths. Foraminiferal tests were likely the predominant sand-sized particles available to worms in the Miocene environments, thus the worms likely did not purposefully select foraminiferal tests. Low-oxygen conditions might have enhanced the potential for tube preservation, but subsequent leaching at the Carmel localities removed most calcareous test material from the sediment. Our specimens appear to be the first report of fossil pectinariids in the Western Hemisphere and only the second record of their occurrence in the Miocene.

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